Plasmid

Part:BBa_K5371203:Design

Designed by: Haoyang Yu   Group: iGEM24_iZJU-China   (2024-09-29)


pESC-URA-MrBBS-BFP


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 4151
    Illegal EcoRI site found at 5819
    Illegal XbaI site found at 9760
    Illegal SpeI site found at 2229
    Illegal SpeI site found at 3459
    Illegal PstI site found at 395
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 4151
    Illegal EcoRI site found at 5819
    Illegal NheI site found at 6589
    Illegal SpeI site found at 2229
    Illegal SpeI site found at 3459
    Illegal PstI site found at 395
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 4151
    Illegal EcoRI site found at 5819
    Illegal BglII site found at 2194
    Illegal BglII site found at 3425
    Illegal BamHI site found at 6497
    Illegal XhoI site found at 6567
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 4151
    Illegal EcoRI site found at 5819
    Illegal XbaI site found at 9760
    Illegal SpeI site found at 2229
    Illegal SpeI site found at 3459
    Illegal PstI site found at 395
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 4151
    Illegal EcoRI site found at 5819
    Illegal XbaI site found at 9760
    Illegal SpeI site found at 2229
    Illegal SpeI site found at 3459
    Illegal PstI site found at 395
    Illegal NgoMIV site found at 1676
    Illegal AgeI site found at 6114
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 1085
    Illegal BsaI.rc site found at 7930
    Illegal SapI site found at 6847
    Illegal SapI.rc site found at 932


Design Notes

Stop codons of ERG20 and MrBBS were removed for continuous and complete expression of ERG20-linker-MrBBS to prevent a premature stop in this case. Length of the linker is adjusted to avoid frameshift, which may cause faulty translation. Codons of the linker is designed to avoid polarized amino acids or those with large residues.


Source

pESC-URA-MrBBS-BFP was fully synthesized by and purchased from Sangon Biotech (Shanghai) Co., Ltd.

References